Biotope Monitoring Techniques
To undertake surveys, surveillance and monitoring of Zostera
biotope attributes, site managers will need to identify the most appropriate and
cost-effective field and analytical methods, as well as determining the quality assurance
requirements. Analytical methods include Geographical Information Systems (GIS) and Remote
Sensing Information Systems. A major advantage in using a mixed monitoring strategy,
employing a combination of the methods outlined below, is the production of more accurate
maps allied with the increased flexibility of interpretation and query within GIS.
Techniques that can be used to monitor Zostera biotope
attributes are listed below. In the following sections, each technique is briefly
described, and its advantages and disadvantages summarized. Examples of the use of
particular methods are given.
Aerial remote sensing techniques
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- Aerial photography (colour or infra-red)
- Satellite sensor images
- Compact Airborne Spectrographic Imager (CASI)
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Sublittoral remote sensing techniques
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- Acoustic Ground Discrimination Systems e.g. RoxAnnTM , side-scan sonar
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- Underwater video
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- Remotely-operated vehicles (ROV)
- Towed video
- Drop-down video
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- Remote sampling
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- Field observers
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- Divers
- Intertidal field biologists
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Aerial remote sensing techniques
Aerial remote sensing techniques include aerial and infrared photography, satellite
sensor images and multi-spectral scanning imagery (CASI).
Aerial photography
A vertically mounted camera on a light aircraft takes high resolution,
large format, digital natural colour transparencies, in transects across the site. Using
infra-red, the methodology is the same, but this format allows better differentiation
between intertidal algae and Zostera. The advantages and disadvantages are
summarized below:
Advantages |
Disadvantages |
- Cost-effective (despite high cost)
- Allows large areas to be mapped relatively accurately
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- Requires ground-truthing, as there may be problems distinguishing between Zostera
and algal cover, and in detecting seasonal variations in leaf cover
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- Sparse Zostera cover is not detected
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- Interpretation is difficult (cannot rely upon classification of spectral images)
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- Poor penetration below sea level. Applicability is limited to very shallow, clear water
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- Can be limited by weather conditions
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BKS Surveys Ltd. tested the usefulness of aerial photography for mapping Zostera beds
in the Isles of Scilly SAC and at Lindisfarne and Budle Bay (within the Berwickshire/
North Northumberland SAC) in 1996. Infra-red photography was found to be more effective
than natural colour, but difficulties were experienced in distinguishing between living
and dead material, and in distinguishing Zostera from the alga Enteromorpha
(P. Gilliland, pers. comm.). The Isles of Scilly aerial survey was ground-truthed by the
Coral Cay Conservation Sub-Aqua Club in 1997. The technique was found to be valid but the
density classes were found to be optimistically high (Irving et al., 1998).
Satellite sensor images
Images from satellite sensors (Landsat Thematic Mapper & SPOT XS)
can be used for a number of mapping applications. However, the habitat classification
accuracy is highly dependent upon the methods used and different habitats may not be
accurately distinguished (Mumby et al., 1997).
Compact Airborne Spectrographic Imager (CASI)
The Compact Airborne Spectrographic Imager is a digital airborne sensor
providing high spectral and spatial resolution. It has been used for a number of mapping
applications, principally on tropical reefs and seagrass beds. This sensor is mounted on a
light aircraft and can be flown for example, at 3000 m giving 4 million pixels in 15
bands, and at 750 m for 1 million pixels in 8 bands. This provides considerable mapping
accuracy and its application for mapping Zostera biotopes is under review. Initial
trials suggest that predictions of standing crop using CASI give results to a similar
order of magnitude to quadrat sampling in situ (Mumby et al., 1997). CASI is now
being tested and used by the Environment Agency, SEPA and water companies.
Advantages |
Disadvantages |
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High cost |
Allows large areas to be mapped in great
detail
Provides an indication of standing crop biomass |
Likely to require some ground-truthing to
confirm the Zostera biotope |
Data is easily geo-referenced |
Can be limited by weather conditions |
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Sublittoral remote sensing techniques
Acoustic Ground Discrimination Systems (AGDS) are a
comparatively recent development in through-water remote sensing and are becoming
increasingly important in the large-scale mapping of benthic habitats and communities. The
two principal techniques relevant to the mapping of subtidal Zostera biotopes are
RoxAnnTM and side-scan sonar.
RoxAnnTM is an electronic system using a sonar signal. The
first and second echoes returned from the seabed are re-analyzed. This analysis derives
values for the roughness and hardness of the seabed. By integrating these data with other
information on water depth and position, a map of the physical characteristics and
distribution of substratum types can be produced. The biotic characteristics of many
marine communities will predictably affect the values recorded and consequently, it is
possible to map the distribution and the extent of these characteristic benthic
communities. An essential part of any AGDS survey is to adequately ground-truth the data
to confirm the habitats and communities mapped. Differential GPS can be used for position
fixing.
Advantages |
Disadvantages |
- Low cost
- Allows large areas to be mapped relatively quickly
- The broad scale maps will display habitats, lifeforms and some biotopes
- Data are easily geo-referenced
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There can be misidentification of
communities that have similar physical characteristics but very different biological
characteristics.
Many biotopes are differentiated or defined by features to which RoxAnnTM
is completely insensitive |
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- Requires considerable ground truthing to confirm Zostera biotopes
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- The equipment requires an 8-10 m boat and consequently, access to shallow areas may be
limited.
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- Rough seas may affect the accuracy of the data
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When using RoxAnnTM around the Isles of Scilly, it was
possible to clearly differentiate between dense Zostera beds and sand, but the beds
could not be distinguished from alga-covered rock or gravel areas. Side-scan sonar clearly
demarcated dense Zostera beds with eroding margins but was insensitive to sparse Zostera
beds (Munro & Nunny, 1998).
Underwater video
The use of video for underwater survey is becoming increasingly
important as it allows a permanent record of many aspects of benthic biotopes to be kept.
Three remote video surveying techniques can be employed in the study of Zostera beds,
Remotely-operated vehicles (ROVs), towed video and drop-down video.
The ROV is the most versatile system, as it is a mobile vehicle that
has complete three-dimensional movement in the water and is highly manoeuvrable. A high
quality camera and lighting system allows good quality video to be obtained. An ROV can be
operated at a height above a Zostera bed, and flown along a transect to obtain data
on the distribution, extent and boundary dynamics of the bed. It can also be flown into
the bed to obtain data on plant condition, bed density and associated species diversity.
A towed video camera is mounted on a light-weight, metal sledge that is
towed at a known speed over the seabed by a boat. This method can provide information on
the extent of a Zostera bed, and may be able to gather additional information on
the beds boundary dynamics. However, one disadvantage of the technique is that
repeated passes of a towed sledge through a Zostera bed may cause some physical
damage.
The drop-down video is the simplest and cheapest of all three remote
video surveying techniques. It consists of a video camera in a waterproof casing, mounted
in a simple metal frame. The camera is held off the seabed and points down and forwards.
When deployed, the camera will obtain spot information over a small field of view,
allowing identification of the Zostera biotope in that location, and providing an
indication of the plant density and associated community. The system is quick to deploy
and recover.
Technique |
Advantages |
Disadvantages |
ROV |
- No time or depth limits
- Can survey large areas of seabed
- Highly manoeuvrable
- Versatile, providing both overview and close-up (detailed) data
- Can provide continuous data transects
- Easy deployment
- Can ground-truth remote sensing surveys
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High cost
Requires hard boat to operate, restricted access to shallow areas
Difficult to fly in straight transects
Relatively slow flight speed |
Towed video |
- No time depth limits
- Can survey large areas of seabed, faster than an ROV
- Provides continuous data transects and is easy to use in a grid pattern
- Can ground-truth remote sensing surveys
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Requires hard boat to operate, restricted
access to shallow areas
May cause physical damage to Zostera biotopes
Provides generally poor data on biotope quality, associated communities
and plant condition
Deployment may be constrained by obstacles on the seabed |
Drop-down video |
- Low cost
- Easily deployed
- Many drops can be completed in a day
- Can ground-truth remote sensing surveys
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Requires hard boat to operate, restricted
access to shallow areas
Generally poor image quality
Provides generally poor data on biotope quality, associated communities
and plant condition
Deployment may be constrained by obstacles on the seabed |
Remote sampling
Grabs and cores can be used to sample Zostera beds. However, as
a destructive sampling technique, with the potential to cause damage to the beds, their
widespread application as a monitoring tool is likely to be restricted to targeted
studies, relating to plant status and aspects of infaunal community structure.
A variety of grabs and cores can be employed on the shore and from
boats. Those commonly employed by biologists in the intertidal and shallow sublittoral
zones are tube-corers, Van Veen grabs and Day grabs. The data obtained from these samples
can provide useful information on the substratum type, plant condition, plant and rhizome
density, sexual status and infaunal community composition. It is possible to determine the
location of a sublittoral Z. marina bed and to establish its approximate extent
using a series of grab transects. However, this is likely to be both time-consuming and
destructive.
Advantages |
Disadvantages |
- Simple to deploy
- Provides physical samples for subsequent analysis
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Destructive sampling, a form of physical
damage to which Zostera beds are particularly vulnerable |
The sampling and analysis techniques are
well-established |
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- Can measure a number of Zostera attributes in each sample
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Field observers
An experienced and skilled field biologist, with sufficient time and
resources, will often provide the best quality data when monitoring complex communities
such as Zostera biotopes. The remote sensing and sampling techniques outlined above
will provide quick and cost-effective data over a large area, for many Zostera
attributes, particularly distribution and extent. However, many aspects of detailed
ecological monitoring of Zostera biotopes require hands-on fieldwork, both
intertidally and subtidally.
Divers
An indication of the quality of a subtidal Z. marina biotope and
its associated community can be provided by the remote video techniques outlined above,
most successfully using an ROV. However, to obtain more comprehensive information on the
species diversity, including the presence of characteristic and representative species,
surveying by experienced diving biologists will be required.
There are many techniques that divers can employ, including MNCR Phase
II and III surveys, which involve taking core and grab samples for later analysis. In
addition, targeted studies and monitoring of key attributes can be undertaken.
Intertidal field biologists
Intertidal field biologists can collect monitoring data for the
majority of intertidal Zostera attributes, often in the same site visit. MNCR Phase
II and III survey methodologies can be employed. Samples can be collected, and remote
sensing can be accurately ground-truthed.
Field observers |
Advantages |
Disadvantages |
Divers |
- The most flexible survey / sampling technique for monitoring Z. marina
- Allows first hand observation of Z. marina attributes
- Several Z. marina attributes can be monitored in one dive
- Allows repeatable fixed point monitoring
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High cost
Time limited
Can only cover small areas during each dive |
Intertidal field biologists |
- The most flexible survey / sampling technique for monitoring intertidal Zostera
species
- Allows first hand observation of intertidal Zostera species attributes
- Several intertidal Zostera species attributes can be monitored on one visit
- Allows repeatable fixed point monitoring
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High cost
Time limited (Tides)
Can only cover small areas during each site visit |
Next Section
References
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